STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13318.1Transcriptional regulator, homeodomain family protein. (219 aa)    
Predicted Functional Partners:
ACN13319.1
Predicted NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.794
ACN13320.1
Predicted NADH:flavin oxidoreductase.
  
  
 0.770
ACN14125.1
Transcriptional regulator (TetR-family protein).
  
     0.744
ACN13921.1
Transcriptional regulator (TetR family protein).
  
     0.728
ACN15507.1
HTH-type transcriptional regulator (TetR-family protein).
  
     0.659
ACN13317.1
mutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase).
  
  
 0.562
lysE2
LysE2; Lysine/threonine exporter protein LysE.
 
     0.558
ACN16274.1
Predicted polyketide synthase.
     
 0.478
ACN15702.1
Putative penicillin acylase precursor; contains small and large subunit.
  
     0.445
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.