STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13331.1Inner membrane transport protein (PmrA-like protein). (817 aa)    
Predicted Functional Partners:
ACN13332.1
Predicted phosphoserine phosphatase RsbU (Sigma factor regulation protein RsbU).
 
    0.862
ACN13329.1
Conserved hypothetical protein.
   
 0.775
ACN13333.1
Predicted anti-sigma F protein (E-sigma F).
       0.737
ACN16792.1
TPR repeat family protein.
  
     0.679
ACN16274.1
Predicted polyketide synthase.
 
  
 0.666
ACN13552.1
Predicted anti-sigma factor antagonist RsbV (Anti-anti-sigma-B factor).
  
     0.561
ACN13334.1
Predicted anti-anti-sigma factor (ant-sigma factor regulator); Belongs to the anti-sigma-factor antagonist family.
 
     0.553
ACN13777.1
Hypothetical protein.
  
     0.513
ACN15613.1
Conserved hypothetical protein.
  
     0.453
ACN17137.1
Conserved hypothetical protein.
  
     0.447
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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