STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13332.1Predicted phosphoserine phosphatase RsbU (Sigma factor regulation protein RsbU). (666 aa)    
Predicted Functional Partners:
ACN13333.1
Predicted anti-sigma F protein (E-sigma F).
 
 
 0.975
ACN13334.1
Predicted anti-anti-sigma factor (ant-sigma factor regulator); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.955
rsbW1
RsbW1; Anti-sigma regulatory factor RsbW (Ser/Thr protein kinase).
 
 0.923
rsbV
RsbV; Anti-anti-sigma regulatory factor RsbV (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.915
ACN13331.1
Inner membrane transport protein (PmrA-like protein).
 
    0.862
ACN17409.1
Putative Anti-anti-sigma regulatory factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.854
srf
Srf; Anti-sigma regulatory factor Srf (sigma-B negative effector/serine-protein kinase).
 
 
 0.826
barA
BarA; Signal transduction histidine kinase BarA.
 
  
 0.784
ACN17411.1
Putative two-component system sensor protein.
  
 0.781
ACN17381.1
Sensory box histidine kinase/response regulator.
  
 0.780
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.