STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13338.1Putative glyoxalase/dioxygenase/bleomycin resistance protein. (115 aa)    
Predicted Functional Partners:
ACN16274.1
Predicted polyketide synthase.
  
 
 0.650
sdhC
SdhC; Succinate dehydrogenase/fumarate reductase, cytochrome b containing subunit SdhC.
   
  
 0.573
mcmL
McmL; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.557
gltD3
GltD3; Glutamate synthase, beta chain GltD.
  
  
 0.509
birA
BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.507
fdx1
Fdx1; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1.
  
  
 0.500
fdx4
Fdx4; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx4.
  
  
 0.500
fdx6
Fdx6; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx6.
  
  
 0.500
hyfI
HyfI; Hydrogenase HyfI homolog, small subunit.
  
  
 0.500
ACN17015.1
Ferredoxin (Fe-4S iron-sulfur cluster binding protein).
  
  
 0.500
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.