STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13394.1Conserved hypothetical protein. (84 aa)    
Predicted Functional Partners:
ACN16803.1
Putative metal-dependent hydrolase of the beta-lactamase superfamily.
  
     0.639
ACN13568.1
Conserved hypothetical protein.
  
     0.625
recN
RecN; May be involved in recombinational repair of damaged DNA.
       0.614
ACN17299.1
Conserved hypothetical protein.
  
     0.603
ACN16838.1
Conserved hypothetical protein.
  
     0.597
gltA1
GltA1; Citrate (si)-synthase GltA1; Belongs to the citrate synthase family.
       0.586
livF1
LivF1; Branched-chain amino acid transporter, ATP-binding protein LivF.
       0.553
livM1
LivM1; High-affinity branched-chain amino acid transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
       0.553
ACN13396.1
Putative Fe2+ transport system protein B.
       0.541
livG1
LivG1; Branched-chain amino acid transporter, ATP-binding component LivG.
       0.541
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.