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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13396.1Putative Fe2+ transport system protein B. (321 aa)    
Predicted Functional Partners:
fur
Fur; Ferric uptake regulation protein; Belongs to the Fur family.
 
  
 0.844
recN
RecN; May be involved in recombinational repair of damaged DNA.
       0.785
livF1
LivF1; Branched-chain amino acid transporter, ATP-binding protein LivF.
       0.773
livG1
LivG1; Branched-chain amino acid transporter, ATP-binding component LivG.
       0.773
livM1
LivM1; High-affinity branched-chain amino acid transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
       0.773
livH1
LivH1; High-affinity branched-chain amino acid transporter, permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
       0.741
feoA
FeoA; Ferrous iron (Fe2+) transport protein FeoA.
  
  
 0.700
ACN13394.1
Conserved hypothetical protein.
       0.541
livJ1
LivJ1; High-affinity branched chain amino acid transporter, leu/ile/val-binding protein precursor LivJ (LS-BP) (L-BP).
       0.480
ACN14314.1
Putative N-acetylmuramoyl-L-alanine amidase AmpD.
  
     0.461
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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