STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13424.1HTH-type transcriptional regulator (TetR-family protein). (243 aa)    
Predicted Functional Partners:
ACN13425.1
Putative aminoglycoside phosphotransferase.
 
   
 0.910
ACN13423.1
acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein.
 
   
 0.810
ACN13422.1
Phosphoglycerate mutase (PGAM) / bisphosphoglycerate mutase (BPGM).
 
    0.808
fabG1
FabG1; 3-oxoacyl (acyl-carrier protein) reductase FabG1.
 
   
 0.761
ACN13426.1
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.730
ACN14114.1
Transcriptional regulator (TetR-family protein).
  
     0.652
ACN15532.1
Selenocysteine-containing oxidoreductase fusion protein (N:MarR-regulator domain-C:molybdopterin oxidoreductase) (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.650
ACN16274.1
Predicted polyketide synthase.
     
 0.478
uspA9
UspA9; Universal stress protein UspA1.
  
    0.472
acd15
Acd15; acyl-CoA dehydrogenase Acd15.
  
   
 0.466
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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