STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctM1DctM1; TRAP-type C4-dicarboxylate permease, large subunit DctM1. (430 aa)    
Predicted Functional Partners:
dctQ1
DctQ1; TRAP-type C4-dicarboxylate permease, small subunit DctQ1.
 
 
 0.978
dctP1
DctP1; TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP1.
  
 0.978
dctP11
DctP11; TRAP-type C4-dicarboxylate transporter, periplasmic component DctP11.
  
 0.876
dctP10
DctP10; TRAP-type C4-dicarboxylate transporter, periplasmic component DctP10.
  
 0.861
ACN17865.1
DctP9; TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
 0.850
ACN17866.1
Putative TRAP-type C4-dicarboxylate transport system, small permease component.
 
 
 0.839
dctQ9
DctQ9; TRAP-type C4-dicarboxylate permease, small subunit DctQ9.
 
 
 0.838
dctP9
DctP9; TRAP-type C4-dicarboxylate transporter, periplasmic component DctP9.
  
 0.824
dctP8
DctP8; TRAP-type C4-dicarboxylate transporter, periplasmic component DctP8.
  
 0.816
dctP2
DctP2; TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP2.
  
 0.798
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.