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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrF1-2HdrF1; Heterodisulfide reductase, subunit HdrF1 (HdrC homologue protein). (567 aa)    
Predicted Functional Partners:
hdrF1
HdrF1; Heterodisulfide reductase, subunit HdrF1' (HdrB homologue protein).
 
 
 0.974
hdrD3
HdrD3; Heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein).
  
 
 0.950
qmoB
QmoB; Quinone-interacting membrane-bound oxidoreductase complex, subunit QmoB.
 
 
 0.939
glpB1
GlpB1; Anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpB1.
 
  
 0.876
glpA1
GlpA1; Anaerobic glycerol-3-phosphate dehydrogenase, subunit GlpA1; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.850
hdrD2-2
HdrD2; Heterodisulfide reductase, subunit HdrD2' (HdrB homologue protein).
 
 
 0.846
ACN16161.1
Putative fusion protein, heterodisulfide reductase (HdrA) / ferredoxin (iron-sulfur-binding protein).
 
 
 0.757
ACN16160.1
Putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD).
 
 
 0.742
mvhD7
MvhD7; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD7 (4Fe-4S).
 
 
 0.730
hdrA3-2
HdrA3; Heterodisulfide reductase HdrA3' (second part of two subunit HdrA3).
 
 
 0.718
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.