STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhE1FdhE1; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. (303 aa)    
Predicted Functional Partners:
fdhB2
FdhB2; Periplasmic formate dehydrogenase, beta subunit FdhB2 (4Fe-4S family protein).
 
  
 0.899
fdhA2
FdhA2; Periplasmic formate dehydrogenase, alpha subunit FdhA2 (selenocysteine protein).
 
 
 
 0.897
fdhA8
FdhA8; Periplasmic formate dehydrogenase, alpha subunit FdhA8 (selenocysteine protein).
 
 
 
 0.845
fdhA7
FdhA7; Periplasmic formate dehydrogenase, alpha subunit FdhA7 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.844
fdhB8
FdhB8; Periplasmic formate dehydrogenase, beta subunit FdhB8 (4Fe-4S family protein).
 
  
 0.800
fdhB7
FdhB7; Periplasmic formate dehydrogenase, beta subunit FdhB7 (4Fe-4S family protein).
 
  
 0.793
mopA
MopA; Molybdopterin oxidoreductase, iron-sulfur binding subunit MopA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.506
ACN17389.1
Hypothetical protein.
 
     0.470
cyaA2
CyaA2; Adenylate cyclase CyaA (ATP pyrophosphate-lyase) (Adenylyl cyclase).
  
     0.461
rseC
RseC; Predicted regulator of sigma E activity RseC.
  
     0.409
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.