STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eutCEutC; Ethanolamine ammonia-lyase, light chain EutC; Belongs to the EutC family. (252 aa)    
Predicted Functional Partners:
eutB
EutB; Ethanolamine ammonia-lyase, heavy chain EutB.
 0.999
glpQ1
GlpQ1; Glycerophosphoryl diester phosphodiesterase GlpQ.
     
  0.900
glpQ2
GlpQ2; Glycerophosphoryl diester phosphodiesterase, periplasmic component GlpQ [precursor].
     
  0.900
ACN13474.1
ABC-type transporter, substrate-binding protein.
       0.618
ACN13477.1
Conserved hypothetical protein.
       0.464
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.