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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13511.1Conserved hypothetical protein. (179 aa)    
Predicted Functional Partners:
sucD1
SucD1; succinyl-CoA synthetase, alpha subunit SucD1 (succinyl-CoA ligase).
 
     0.958
ACN15289.1
Putative acetyl-CoA synthetase.
 
     0.956
sucD3
SucD3; succinyl-CoA synthetase, alpha subunit SucD3 (SCS-alpha).
 
     0.939
ACN15288.1
Conserved hypothetical protein.
 
     0.905
sucC2
SucC2; succinyl-CoA synthetase, beta subunit SucC1.
 
     0.857
sucC3
SucC3; succinyl-CoA synthetase, beta subunit SucC2.
 
     0.829
ACN13412.1
Conserved hypothetical protein.
 
     0.759
ACN17672.1
Putative acyl-CoA synthetase.
 
     0.757
rnc
Two domain fusion protein Includes: metal-dependent phosphoesterase / ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.549
ACN13510.1
Predicted transglycosylase associated protein YeaQ.
  
    0.497
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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