STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifB1NifB1; Molybdenum-iron cofactor biosynthesis protein NifB (radical SAM superfamily). (411 aa)    
Predicted Functional Partners:
nifK2
NifK2; Nitrogenase associated molybdenum-iron protein, beta chain NifK; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.986
nifK1
NifK1; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.984
nifH1
NifH1; Nitrogen fixation-related protein NifH (4Fe-4S cluster binding protein); Belongs to the NifH/BchL/ChlL family.
 
  
 0.981
nifH2
NifH2; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein.
 
  
 0.943
nifD2
NifD2; Nitrogenase associated molybdenum-iron protein, alpha chain NifD.
 
  
 0.906
nifE
NifE; Nitrogenase molybdenum-iron cofactor biosynthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
  
 0.870
glnB2
GlnB2; Nitrogen regulatory protein GlnB2 (P-II; transcriptional regulator of glnA).
 
  
 0.778
nifD1
NifD1; Nitrogenase associated molybdenum-iron protein, alpha chain NifD.
 
  
 0.735
ACN13528.1
Conserved hypothetical protein.
  
    0.726
glnB3
GlnB3; Nitrogen regulatory protein GlnB3 (P-II; transcriptional regulator of glnA).
 
  
 0.661
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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