STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13552.1Predicted anti-sigma factor antagonist RsbV (Anti-anti-sigma-B factor). (102 aa)    
Predicted Functional Partners:
ACN13372.1
Putative two-component response regulator receiver protein (phosphoserine phosphatase).
 
 
 0.927
ACN13371.1
Predicted anti-sigma regulatory factor RsbW1 (serine/threonine protein kinase).
 
 
 0.890
flgE
FlgE; Flagellar hook protein FlgE.
  
    0.809
ACN17411.1
Putative two-component system sensor protein.
  
  
 0.780
ACN13553.1
Hypothetical protein.
       0.779
ACN16713.1
Putative signal transduction protein.
 
  
 0.747
ACN17381.1
Sensory box histidine kinase/response regulator.
  
  
 0.746
barA
BarA; Signal transduction histidine kinase BarA.
  
  
 0.746
ACN17978.1
GGDEF domain protein.
  
  
 0.717
ACN15297.1
ABC-type transporter involved in resistance to organic solvents, ATP-binding protein.
   
   0.709
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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