rpmI protein (Desulfobacterium autotrophicum)

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Score

rpmI

RpmI; 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)

Predicted Functional Partners:

rplT

0.997

rpsR

0.990

rpsF

0.990

rpmF

0.989

rpsP

0.988

rpmC

0.988

rplJ

0.988

rplK

0.988

rpmB

0.987

rpsB

0.987

Your Current Organism:

Desulfobacterium autotrophicum

NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplJ	rplK	HRM2_36340	HRM2_36360	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.996
rplJ	rplT	HRM2_36340	HRM2_04600	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.988
rplJ	rpmB	HRM2_36340	HRM2_12300	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpmB; 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.982
rplJ	rpmC	HRM2_36340	HRM2_36180	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpmC; 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.998
rplJ	rpmF	HRM2_36340	HRM2_31330	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpmF; 50S ribosomal protein L32 (ribosomal protein I) (BL37); Belongs to the bacterial ribosomal protein bL32 family.	0.985
rplJ	rpmI	HRM2_36340	HRM2_04590	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpmI; 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.988
rplJ	rpsB	HRM2_36340	HRM2_17100	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpsB; 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.992
rplJ	rpsF	HRM2_36340	HRM2_18640	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpsF; Binds together with S18 to 16S ribosomal RNA.	0.988
rplJ	rpsP	HRM2_36340	HRM2_31010	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpsP; 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.986
rplJ	rpsR	HRM2_36340	HRM2_18630	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	RpsR; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.988
rplK	rplJ	HRM2_36360	HRM2_36340	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RplJ; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.996
rplK	rplT	HRM2_36360	HRM2_04600	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.988
rplK	rpmB	HRM2_36360	HRM2_12300	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpmB; 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.986
rplK	rpmC	HRM2_36360	HRM2_36180	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpmC; 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.992
rplK	rpmF	HRM2_36360	HRM2_31330	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpmF; 50S ribosomal protein L32 (ribosomal protein I) (BL37); Belongs to the bacterial ribosomal protein bL32 family.	0.988
rplK	rpmI	HRM2_36360	HRM2_04590	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpmI; 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.988
rplK	rpsB	HRM2_36360	HRM2_17100	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpsB; 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.990
rplK	rpsF	HRM2_36360	HRM2_18640	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpsF; Binds together with S18 to 16S ribosomal RNA.	0.990
rplK	rpsP	HRM2_36360	HRM2_31010	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpsP; 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.988
rplK	rpsR	HRM2_36360	HRM2_18630	RplK; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	RpsR; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.986

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