Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACN13601.1 | aor2 | HRM2_04870 | HRM2_04880 | Hypothetical protein. | Aor2; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2. | 0.779 |
| ACN13601.1 | soxA1 | HRM2_04870 | HRM2_04900 | Hypothetical protein. | SoxA1; Sarcosine oxidase, subunit alpha. | 0.759 |
| ACN13601.1 | soxB1 | HRM2_04870 | HRM2_04890 | Hypothetical protein. | SoxB1; Sarcosine oxidase, subunit beta. | 0.826 |
| ACN13932.1 | bioF | HRM2_08190 | HRM2_09040 | Aminotransferase, class V (putative purine catabolism protein PucG). | BioF; 7-keto-8-aminopelargonate synthetase BioF. | 0.920 |
| ACN13932.1 | gcvP1 | HRM2_08190 | HRM2_24980 | Aminotransferase, class V (putative purine catabolism protein PucG). | GcvP1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.907 |
| ACN13932.1 | gcvP2 | HRM2_08190 | HRM2_24970 | Aminotransferase, class V (putative purine catabolism protein PucG). | GcvP2; Glycine cleavage system, dehydrogenase subunit GcvP2. | 0.922 |
| ACN13932.1 | glyA | HRM2_08190 | HRM2_31300 | Aminotransferase, class V (putative purine catabolism protein PucG). | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.944 |
| ACN13932.1 | ltaE | HRM2_08190 | HRM2_12450 | Aminotransferase, class V (putative purine catabolism protein PucG). | LtaE; Low specificity L-threonine aldolase LtaE. | 0.938 |
| ACN13932.1 | soxB1 | HRM2_08190 | HRM2_04890 | Aminotransferase, class V (putative purine catabolism protein PucG). | SoxB1; Sarcosine oxidase, subunit beta. | 0.942 |
| aor2 | ACN13601.1 | HRM2_04880 | HRM2_04870 | Aor2; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2. | Hypothetical protein. | 0.779 |
| aor2 | soxA1 | HRM2_04880 | HRM2_04900 | Aor2; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2. | SoxA1; Sarcosine oxidase, subunit alpha. | 0.915 |
| aor2 | soxB1 | HRM2_04880 | HRM2_04890 | Aor2; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2. | SoxB1; Sarcosine oxidase, subunit beta. | 0.894 |
| bioF | ACN13932.1 | HRM2_09040 | HRM2_08190 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | Aminotransferase, class V (putative purine catabolism protein PucG). | 0.920 |
| bioF | gcvP1 | HRM2_09040 | HRM2_24980 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | GcvP1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.933 |
| bioF | gcvP2 | HRM2_09040 | HRM2_24970 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | GcvP2; Glycine cleavage system, dehydrogenase subunit GcvP2. | 0.934 |
| bioF | glyA | HRM2_09040 | HRM2_31300 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.943 |
| bioF | ltaE | HRM2_09040 | HRM2_12450 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | LtaE; Low specificity L-threonine aldolase LtaE. | 0.922 |
| bioF | soxB1 | HRM2_09040 | HRM2_04890 | BioF; 7-keto-8-aminopelargonate synthetase BioF. | SoxB1; Sarcosine oxidase, subunit beta. | 0.917 |
| gcvP1 | ACN13932.1 | HRM2_24980 | HRM2_08190 | GcvP1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Aminotransferase, class V (putative purine catabolism protein PucG). | 0.907 |
| gcvP1 | bioF | HRM2_24980 | HRM2_09040 | GcvP1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | BioF; 7-keto-8-aminopelargonate synthetase BioF. | 0.933 |
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