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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxA1SoxA1; Sarcosine oxidase, subunit alpha. (694 aa)    
Predicted Functional Partners:
soxB1
SoxB1; Sarcosine oxidase, subunit beta.
  
 0.981
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
 
 0.973
aor2
Aor2; Tungsten-containing aldehyde ferredoxin:oxidoreductase Aor2.
 
   
 0.915
ACN15506.1
Iron-sulfur cluster-binding protein (Rieskeprotein, 2Fe-2S protein).
  
 
 0.876
ACN16857.1
Two-component fusion protein (N:Molybdopterin dehydrogenase, FAD-binding domain-C:Carbon monoxide dehydrogenase medium chain).
 
 
 0.874
ACN16473.1
Putative CO dehydrogenase flavoprotein.
  
 
 0.858
mop1
Mop1; Aldehyde oxidoreductase Mop.
  
 
 0.856
mop2
Mop2; Aldehyde oxidoreductase Mop.
  
 
 0.856
coxL
CoxL; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL.
  
 
 0.834
soxB2
SoxB2; Sarcosine oxidase, subunit beta SoxB.
  
 0.818
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.