STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13615.1Hypothetical protein. (206 aa)    
Predicted Functional Partners:
pilT2
PilT2; Pili retraction protein PilT2.
 
   
 0.906
ACN17411.1
Putative two-component system sensor protein.
  
 
 0.863
pilT1
PilT1; Pili retraction protein PilT1.
 
   
 0.799
ACN13616.1
Putative 4-hydroxybutyrate CoA-transferase.
  
 
 0.789
ACN14230.1
Hypothetical protein.
  
     0.689
ACN15559.1
GTPase family protein.
  
     0.667
ACN16224.1
Conserved hypothetical protein.
  
     0.659
ACN14798.1
Sensory box histidine kinase/response regulator.
  
 
 0.647
ACN17829.1
Conserved hypothetical protein.
  
     0.644
ACN16301.1
Diguanylate cyclase (GGDEF) domain protein.
  
 
 0.639
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.