Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACN14952.1 | upp | HRM2_18500 | HRM2_05330 | Oxidoreductase (3-oxoacyl-[acyl-carrier-protein] reductase). | Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.893 |
| codA | pyrR | HRM2_46240 | HRM2_09210 | CodA; Cytosine deaminase CodA. | PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.913 |
| codA | upp | HRM2_46240 | HRM2_05330 | CodA; Cytosine deaminase CodA. | Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.945 |
| glyA | guaA1 | HRM2_31300 | HRM2_18870 | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | GuaA1; Catalyzes the synthesis of GMP from XMP. | 0.644 |
| glyA | pyrF | HRM2_31300 | HRM2_35880 | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.440 |
| glyA | rpiB | HRM2_31300 | HRM2_31310 | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | RpiB; Ribose-5-phosphate isomerase RpiB (phosphoriboisomerase B). | 0.983 |
| glyA | upp | HRM2_31300 | HRM2_05330 | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.894 |
| guaA1 | glyA | HRM2_18870 | HRM2_31300 | GuaA1; Catalyzes the synthesis of GMP from XMP. | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.644 |
| guaA1 | pyrF | HRM2_18870 | HRM2_35880 | GuaA1; Catalyzes the synthesis of GMP from XMP. | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.632 |
| guaA1 | pyrH | HRM2_18870 | HRM2_17120 | GuaA1; Catalyzes the synthesis of GMP from XMP. | PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.722 |
| guaA1 | pyrR | HRM2_18870 | HRM2_09210 | GuaA1; Catalyzes the synthesis of GMP from XMP. | PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.510 |
| guaA1 | rpiB | HRM2_18870 | HRM2_31310 | GuaA1; Catalyzes the synthesis of GMP from XMP. | RpiB; Ribose-5-phosphate isomerase RpiB (phosphoriboisomerase B). | 0.472 |
| guaA1 | upp | HRM2_18870 | HRM2_05330 | GuaA1; Catalyzes the synthesis of GMP from XMP. | Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.946 |
| guaA1 | uraA | HRM2_18870 | HRM2_05320 | GuaA1; Catalyzes the synthesis of GMP from XMP. | UraA; Uracil permease UraA (uracil/xanthine permease family protein). | 0.594 |
| guaA1 | ushA | HRM2_18870 | HRM2_09650 | GuaA1; Catalyzes the synthesis of GMP from XMP. | UshA; UDP-sugar hydrolase / 5'-nucleotidase UshA [precursor]; Belongs to the 5'-nucleotidase family. | 0.919 |
| pyrF | glyA | HRM2_35880 | HRM2_31300 | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.440 |
| pyrF | guaA1 | HRM2_35880 | HRM2_18870 | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | GuaA1; Catalyzes the synthesis of GMP from XMP. | 0.632 |
| pyrF | pyrH | HRM2_35880 | HRM2_17120 | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | PyrH; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.935 |
| pyrF | pyrR | HRM2_35880 | HRM2_09210 | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.990 |
| pyrF | upp | HRM2_35880 | HRM2_05330 | PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | Upp; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.949 |
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