close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapJ1AapJ1. (119 aa)    
Predicted Functional Partners:
aapJ2
AapJ2.
     0.994
aapM
AapM; Glutamate/glutamine/aspartate/asparagine transport system, permease protein AapM.
 
 
 0.911
aapQ
AapQ; Glutamate/glutamine/aspartate/asparagine transport system, permease protein AapQ.
 
  
 0.905
aapP1
AapP1; Glutamate/glutamine/aspartate/asparagine transport system, ATP-binding component AapP.
 
 
 0.874
ACN17698.1
ABC-type branched-chain amino acid transport-system, permease component.
 
 
 0.836
ACN17699.1
ABC-type branched-chain amino acid transport-system, permease component.
 
  
 0.802
aapP2
AapP2; General L-amino acid transport ATP-binding protein AapP.
 
 
 0.726
glnQ3
GlnQ3; Glutamine transport system, ATP-binding protein GlnQ3.
 
 
 0.421
gltL1
GltL1; Glutamate/aspartate transport system, ATP-binding protein GltL.
 
 
 0.400
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.