STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13688.1Signal transduction family protein (GGDEF domain protein). (559 aa)    
Predicted Functional Partners:
ACN15540.1
Two-component hybrid protein, sensory box hisitidine kinase/adenylate cyclase.
 
  
 0.908
ACN15800.1
Two-component response receiver and regulator protein.
  
 0.892
ACN15670.1
Two-component response receiver and regulator protein.
    
 0.887
amt
Amt; High affinity ammonium transporter Amt (AtAMT1;1).
 
      0.887
ACN17412.1
Putative chemotaxis response regulator.
 
    0.819
ACN13472.1
Signal transduction family protein (GGDEF domain protein).
 
 0.812
ACN17978.1
GGDEF domain protein.
 
 0.776
ACN17381.1
Sensory box histidine kinase/response regulator.
  
 0.761
cheR1
CheR1; Chemotaxis protein methyltransferase CheR.
      0.755
ACN16951.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA; Cold-shock inducible two-component sensory box histidine kinase /regulatory protein (Ntr family protein).
 
 
 0.694
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.