STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13690.1Sigma-54 dependent DNA-binding response regulator (NtrC-type regulator). (451 aa)    
Predicted Functional Partners:
ACN13689.1
CusS; Sensory histidine kinase CusS.
 
 
 0.893
ACN15332.1
Putative pilS, sensory histidne kinase.
 0.837
ACN17240.1
Sensory box hisitidine kinase.
 
 0.809
ACN14210.1
Two-component hybrid sensor and response regulator histidine kinase (Ntr family).
 
 0.763
rpoN
RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.739
rpoE
RpoE; DNA-directed RNA polymerase, specialized sigma subunit RpoE (Sigma-24); Belongs to the sigma-70 factor family. ECF subfamily.
     
 0.635
cheA2
CheA2; Chemotaxis protein CheA.
  
 
 0.501
ACN17639.1
Signal transduction histidine kinase.
 
 
 0.478
ACN13688.1
Signal transduction family protein (GGDEF domain protein).
  
  
 0.474
ACN16843.1
Two-component sensory box histidine kinase/response regulator.
 
 
 
 0.469
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.