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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13707.1Flavodoxin family protein. (146 aa)    
Predicted Functional Partners:
dfx
Dfx; Non-heme iron protein Dfx (desulfoferrodoxin) (Superoxide dismutase).
  
  
 0.615
ACN14827.1
Hypothetical protein.
  
     0.581
ACN14826.1
Phage-related replication protein.
  
     0.573
ACN16151.1
Conserved hypothetical protein.
  
     0.550
ACN15149.1
Methyl-accepting chemotaxis protein (Hemerythrin family protein).
  
  
 0.535
ACN16516.1
Putative oxygen-binding myohemerythrin (MHR).
  
  
 0.535
ACN13723.1
Phage-related replication protein.
  
     0.528
ACN16265.1
Conserved hypothetical protein.
  
     0.526
ACN13466.1
Hypothetical protein.
  
     0.499
rnfB-2
FAD-dependent oxidoreductase (4Fe-4S ferredoxin cluster binding protein); Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
   
 0.478
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.