STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tesBTesB; acyl-CoA thioesterase II (TEII). (292 aa)    
Predicted Functional Partners:
ACN13425.1
Putative aminoglycoside phosphotransferase.
 
  
 0.504
ACN16272.1
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
   
 0.500
ACN14869.1
Putative lysophospholipase L2 (Lecithinase B).
  
     0.499
mdeA
MdeA; Methionine gamma-lyase MdeA (L-methionase).
  
    0.473
plsB
PlsB; Glycerol-3-phosphate acyltransferase PlsB (GPAT); Belongs to the GPAT/DAPAT family.
 
   
 0.470
ACN13430.1
Conserved hypothetical protein.
  
 
 0.458
ACN16274.1
Predicted polyketide synthase.
    
 0.408
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.