STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oadB1OadB1; Oxaloacetate decarboxylase, beta chain OadB. (375 aa)    
Predicted Functional Partners:
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
 
 0.995
gcdA1
GcdA1; glutaconyl-CoA decarboxylase GcdA.
 
 
 0.921
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
    
 0.920
mae
Mae; NAD/NADP-dependent malate dehydrogenase (malic enzyme) (NAD-ME).
    
 0.913
pyk
Pyk; Pyruvate kinase (PK); Belongs to the pyruvate kinase family.
    
 0.910
ppsA3
PpsA3; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA3 (PEP synthase).
    
 0.903
ACN14353.1
Putative pyruvate phosphate dikinase.
    
 0.903
ppsA4
PpsA4; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA4 (PEP synthase).
    
 0.903
ppsA5
PpsA5; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.903
ppsA6
PpsA6; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA6 (PEP synthase); Belongs to the PEP-utilizing enzyme family.
    
 0.903
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.