close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pldBPldB; Lysophopholipase PldB (alpha/beta hydrolase family protein). (276 aa)    
Predicted Functional Partners:
glpK
GlpK; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.939
soxA2
SoxA2; Sarcosine oxidase, subunit alpha SoxA.
   
 
 0.875
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
   
   0.871
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
  
 
 0.862
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
  
 
 0.855
fadD3
FadD3; long-chain-fatty-acid--CoA ligase FadD3 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
 
  
 0.828
ACN15958.1
Two-component sensory box histidine kinase/response regulator protein.
    
 0.813
fadD1
FadD1; long-chain-fatty-acid--CoA ligase FadD1 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
    
 0.806
fadD6
FadD6; long-chain-fatty-acid--CoA ligase FadD6 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
    
 0.806
alkK2
AlkK2; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK.
    
 0.806
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.