Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACN13840.1 | cspG | HRM2_07260 | HRM2_07270 | Plasmid maintenance system antidote protein (HTH-type transcriptional regulator). | CspG; Cold shock-like protein CspG (CPS-G). | 0.459 |
| ACN14810.1 | cspG | HRM2_17040 | HRM2_07270 | Hypothetical protein. | CspG; Cold shock-like protein CspG (CPS-G). | 0.451 |
| ACN14810.1 | rplT | HRM2_17040 | HRM2_04600 | Hypothetical protein. | RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.947 |
| ACN14810.1 | rpmA | HRM2_17040 | HRM2_31710 | Hypothetical protein. | RpmA; 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.982 |
| ACN14810.1 | rpmE | HRM2_17040 | HRM2_17070 | Hypothetical protein. | RpmE; Binds the 23S rRNA. | 0.976 |
| ACN14810.1 | rpsL | HRM2_17040 | HRM2_36300 | Hypothetical protein. | RpsL; With S4 and S5 plays an important role in translational accuracy. | 0.976 |
| ACN14810.1 | rpsQ | HRM2_17040 | HRM2_36170 | Hypothetical protein. | RpsQ; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.921 |
| ACN15352.1 | cspG | HRM2_22570 | HRM2_07270 | Putative cold shock domain family protein. | CspG; Cold shock-like protein CspG (CPS-G). | 0.755 |
| ACN15352.1 | rapA | HRM2_22570 | HRM2_40500 | Putative cold shock domain family protein. | RapA; RNA polymerase associated protein RapA (ATP-dependent helicase HepA). | 0.566 |
| ACN15352.1 | rplT | HRM2_22570 | HRM2_04600 | Putative cold shock domain family protein. | RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.470 |
| ACN15352.1 | rpmA | HRM2_22570 | HRM2_31710 | Putative cold shock domain family protein. | RpmA; 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.471 |
| ACN15352.1 | rpmE | HRM2_22570 | HRM2_17070 | Putative cold shock domain family protein. | RpmE; Binds the 23S rRNA. | 0.455 |
| ACN15352.1 | rpsL | HRM2_22570 | HRM2_36300 | Putative cold shock domain family protein. | RpsL; With S4 and S5 plays an important role in translational accuracy. | 0.505 |
| ACN15352.1 | rpsQ | HRM2_22570 | HRM2_36170 | Putative cold shock domain family protein. | RpsQ; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.474 |
| cspG | ACN13840.1 | HRM2_07270 | HRM2_07260 | CspG; Cold shock-like protein CspG (CPS-G). | Plasmid maintenance system antidote protein (HTH-type transcriptional regulator). | 0.459 |
| cspG | ACN14810.1 | HRM2_07270 | HRM2_17040 | CspG; Cold shock-like protein CspG (CPS-G). | Hypothetical protein. | 0.451 |
| cspG | ACN15352.1 | HRM2_07270 | HRM2_22570 | CspG; Cold shock-like protein CspG (CPS-G). | Putative cold shock domain family protein. | 0.755 |
| cspG | rapA | HRM2_07270 | HRM2_40500 | CspG; Cold shock-like protein CspG (CPS-G). | RapA; RNA polymerase associated protein RapA (ATP-dependent helicase HepA). | 0.567 |
| cspG | rplT | HRM2_07270 | HRM2_04600 | CspG; Cold shock-like protein CspG (CPS-G). | RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.548 |
| cspG | rpmA | HRM2_07270 | HRM2_31710 | CspG; Cold shock-like protein CspG (CPS-G). | RpmA; 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.471 |
page 1 of 4