Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN13856.1Conserved hypothetical protein. (193 aa)    
Predicted Functional Partners:
malT
MalT; HTH-type transcriptional regulator MalT.
  
     0.715
ACN16990.1
TPR domain family protein.
 
     0.712
ACN13342.1
Hypothetical protein.
  
     0.693
ACN16754.1
Putative flagellar hook-associated protein.
 
    0.675
ACN16131.1
Hypothetical protein.
  
     0.623
ACN16467.1
Conserved hypothetical protein.
  
    0.581
estA
EstA; Carboxylesterase EstA [precursor].
  
     0.561
ACN14292.1
Hypothetical protein.
  
     0.554
ACN17727.1
Putative Fe-S cluster.
  
     0.534
ACN16230.1
Hypothetical protein.
  
     0.525
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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