STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13901.1Sigma-54 dependent DNA-binding response regulator. (467 aa)    
Predicted Functional Partners:
ACN13902.1
Two domain sensory box histidine kinase (methyl-accepting chemotaxis transducer/Ntr-family protein).
 
 
0.829
rpoN
RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.687
cheA2
CheA2; Chemotaxis protein CheA.
  
 
 0.501
ACN13903.1
Cation-efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.486
mcpA1
McpA1; Methyl-accepting chemotaxis protein McpA.
  
    0.445
ACN13250.1
Signal transduction histidine kinase (ATPase).
 
 
 0.434
ACN16174.1
Fusion protein comosed of N:signal transduction protein - C:ATPase-like osmosensitive K+ channel histidine kinase.
 
 
 0.429
flhA
FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.426
ACN13900.1
Hypothetical protein.
       0.424
flhF
FlhF; Flagella associated GTP-binding protein FlhF.
  
  
 0.424
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.