STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrS1ThrS1; threonyl-tRNA synthetase (Threonine--tRNA ligase) (ThrRS). (137 aa)    
Predicted Functional Partners:
ACN17914.1
Putative galactose-1-phosphate uridylyltransferase.
 
     0.631
hasA
HasA; Hyaluronan synthase HasA.
 
  
 0.596
nodC
NodC; N-acetylglucosaminyltransferase (Nodulation protein C) NodC.
 
  
 0.583
ACN13903.1
Cation-efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.574
ACN16952.1
Putative uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.536
ACN13155.1
Glycosyl transferase, group 2 family protein.
  
  
 0.492
ACN14495.1
Putative glucosyltransferase family protein.
  
  
 0.492
ACN14499.1
Putative glycosyl transferase.
  
  
 0.492
ACN13856.1
Conserved hypothetical protein.
  
     0.445
msrAB
MsrAB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.433
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.