STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13908.1ABC-type transporter, substrate binding protein. (378 aa)    
Predicted Functional Partners:
ACN13909.1
ABC-type transporter, membrane spanning protein.
 
  
 0.971
ACN13910.1
ABC-type transporter, ATP-binding protein.
 
  
 0.961
ACN13907.1
Putative (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit.
 
     0.868
ntrB
NtrB; Nitrate uptake ABC-transporter, permease protein NtrB.
 
  
 0.651
ntrC2
NtrC2; Nitrate uptake ABC-transporter, ATP-binding protein NtrC.
 
  
 0.584
ACN16335.1
Putative sulfate transport system, substrate-binding protein.
  
   
 0.532
ACN13592.1
Conserved hypothetical protein.
  
     0.525
ACN13277.1
ABC-type transporter, permease protein (membrane spanning protein).
 
  
 0.524
ACN13224.1
ABC-type transporter, ATP-binding protein (ATPase).
 
  
 0.519
ACN13276.1
ABC-type transporter, ATP-binding protein (ATPase).
 
  
 0.506
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.