STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13910.1ABC-type transporter, ATP-binding protein. (260 aa)    
Predicted Functional Partners:
ACN13909.1
ABC-type transporter, membrane spanning protein.
  
 0.973
ACN13908.1
ABC-type transporter, substrate binding protein.
 
  
 0.961
ACN13549.1
ABC-type transporter, permease protein.
  
 0.941
ACN13277.1
ABC-type transporter, permease protein (membrane spanning protein).
  
 0.905
ntrB
NtrB; Nitrate uptake ABC-transporter, permease protein NtrB.
  
 0.884
ACN13225.1
ABC-type transporter, permease protein (nitrate/sulfonate/bicarbonate transporter).
  
 0.882
modB
ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.865
ACN13697.1
Putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein).
 
      0.864
ssuC
SsuC; Sulfonate ABC-type transporter Ssu, permease protein SsuC.
 
  
 0.845
ntrA
NtrA; Nitrate uptake ABC-transporter, periplasmic binding protein NtrA.
  
 0.822
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.