STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpA1CtpA1; Carboxy-terminal processing protease CtpA [precursor]. (362 aa)    
Predicted Functional Partners:
ACN13939.1
Serine/threonine-protein kinase MRCK alpha (CDC42-binding protein kinase alpha).
       0.782
ACN13940.1
Hypothetical protein.
       0.744
ACN13943.1
ABC-type transporter, permease protein.
   
   0.691
ACN13942.1
Conserved hypothetical protein.
  
    0.679
ACN13944.1
ABC-type transporter, ATP-binding protein.
       0.668
ACN13941.1
Hypothetical protein.
       0.664
ACN13945.1
Predicted serine/threonine protein kinase PpkA.
       0.658
ACN14823.1
Membrane-associated zinc metalloprotease.
 
  
 0.632
ACN14260.1
Putative metallopeptidase.
  
  
 0.558
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
  
    0.531
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.