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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltL1GltL1; Glutamate/aspartate transport system, ATP-binding protein GltL. (241 aa)    
Predicted Functional Partners:
gltK1
GltK1; Glutamate/aspartate transport system, permease protein GltK.
 0.997
gltJ1
GltJ1; Glutamate/aspartate transport system, permease protein GltJ.
 0.996
gltK2
GltK2; Glutamate/aspartate transport system permease protein GltK.
 0.977
gltJ2
GltJ2; Glutamate/aspartate transport system permease protein GltJ.
 0.973
gltI
GltI; Glutamate/aspartate periplasmic-binding protein [Precursor] GltI.
 
 0.956
glnP6
GlnP6; Glutamine transport system, permease protein GlnP6 (His/Glu/Gln/Arg-transporter family protein).
 
 0.932
glnP5
GlnP5; Glutamine transport system, permease protein GlnP5 (His/Glu/Gln/Arg-transporter family protein).
 
 0.925
glnP4
GlnP4; Glutamine transport system, permease protein GlnP4 (His/Glu/Gln/Arg-transporter family protein).
 
 0.922
ACN17141.1
ABC-type amino acid transport system, permease component.
 
 0.913
ACN14640.1
ABC-type amino acid transporter, permease component.
 
 0.908
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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