STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltJ1GltJ1; Glutamate/aspartate transport system, permease protein GltJ. (242 aa)    
Predicted Functional Partners:
gltL1
GltL1; Glutamate/aspartate transport system, ATP-binding protein GltL.
 0.996
gltK1
GltK1; Glutamate/aspartate transport system, permease protein GltK.
 
 
 
0.985
glnH3
GlnH3; Glutamine transport system, glutamine-binding protein GlnH3; Belongs to the bacterial solute-binding protein 3 family.
 
 0.973
gltL2
GltL2; Glutamate/aspartate transport ATP-binding protein GltL.
 0.973
glnH2
GlnH2; Glutamine transport system, glutamine-binding protein GlnH2; Belongs to the bacterial solute-binding protein 3 family.
 
 0.971
gltI
GltI; Glutamate/aspartate periplasmic-binding protein [Precursor] GltI.
 0.965
gltB1
GltB1; Periplasmic solute-binding protein GltB [precursor] (periplasmic glutamate/aspartate binding protein GltB [precursor]).
 
 0.927
gltJ2
GltJ2; Glutamate/aspartate transport system permease protein GltJ.
  
  
 
0.905
gltK2
GltK2; Glutamate/aspartate transport system permease protein GltK.
 
 
 
0.878
glnQ3
GlnQ3; Glutamine transport system, ATP-binding protein GlnQ3.
 
 0.872
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.