Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACN13979.1Zn-dependent dehydrogenase. (578 aa)    
Predicted Functional Partners:
mtp
Mtp; Multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains).
 
   
 0.942
pfkB1
PfkB1; Carbohydrate kinase family protein PfkB1; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.925
fba2
Fba2; Fructose-bisphosphate aldolase Fba.
 
  
 0.868
ACN16274.1
Predicted polyketide synthase.
  
 
 0.727
gap1
Gap1; Glyceraldehyde-3-phosphate dehydrogenase Gap (GAPDH); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.665
ACN13229.1
Putative porin D precursor (outer membrane protein D2) (imipenem/basic amino acid-specific outer membrane pore).
  
   
 0.651
pgk
Pgk; Phosphoglycerate kinase Pgk; Belongs to the phosphoglycerate kinase family.
  
 
 0.645
adh3
Adh3; Iron containing alcohol dehydrogenase Adh1.
  
 
 0.632
adh5
Adh5; Iron containing alcohol dehydrogenase Adh2.
  
 
 0.632
ACN14475.1
Sensory box histidine kinase (PAS/PAC domain protein).
  
 
 0.632
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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