STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN13981.1HTH-type transcriptional repressor (LacI family protein). (331 aa)    
Predicted Functional Partners:
mtp
Mtp; Multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains).
 
 
 
 0.960
gltB2
GltB2; Glutamate synthase [NADPH], large chain (NADPH-GOGAT).
    
 
 0.891
rbsC
RbsC; ABC-type ribose transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.847
ptsH
PtsH; Phosphocarrier protein PtsH (HPr; Histidine-containing protein).
   
 
 0.822
ACN16020.1
Hypothetical protein.
   
 
 0.822
guaA1
GuaA1; Catalyzes the synthesis of GMP from XMP.
    
 
 0.761
rbsA2
RbsA2; ABC-type ribose transport system, ATP-binding protein RbsA (ATPase).
 
  
 0.761
ribAB
RibAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 
 0.760
pheT
PheT; phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.755
cysS3
CysS3; cysteinyl-tRNA synthetase CysS3 (cysteine--tRNA ligase) (CysRS).
   
 
 0.753
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.