STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acd2Acd2; acyl-CoA dehydrogenase Acd2. (603 aa)    
Predicted Functional Partners:
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
  
 0.803
crtA1
CrtA1; 3-hydroxybutyryl-CoA dehydratase Crt.
  
 0.720
ACN17833.1
Putative enoyl-CoA hydratase.
  
 0.720
ACN14106.1
enoyl-CoA hydratase/carnithine racemase [precursor] (Short chain enoyl-CoA hydratase).
  
 0.716
ACN14111.1
enoyl-CoA hydratase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.716
ACN17756.1
enoyl-CoA hydratase.
  
 0.716
atoB1
AtoB1; acetyl-CoA acetyltransferase AtoB1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.708
ACN14000.1
Transcriptional regulator (TetR-family protein).
     
 0.672
ACN16274.1
Predicted polyketide synthase.
  
 0.660
ACN15958.1
Two-component sensory box histidine kinase/response regulator protein.
  
 0.649
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.