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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14066.1Putative 16S rRNA processing protein RimM (selenocysteine protein). (343 aa)    
Predicted Functional Partners:
ACN16043.1
Putative arginine kinase (AK); Belongs to the ATP:guanido phosphotransferase family.
  
     0.605
ACN16395.1
Hypothetical protein.
  
     0.559
napH
NapH; Iron-sulfur binding protein NapH (4Fe-4S ferredoxin).
       0.527
ACN14065.1
Putative sulfatase (transmembrane protein).
       0.445
ACN14012.1
Conserved hypothetical protein.
 
     0.430
ACN14900.1
Putative plasmin-sensitive surface protein (Pls family protein).
  
     0.425
istA
Putative integrase family protein.
  
     0.404
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.