STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14068.1Conserved hypothetical protein. (80 aa)    
Predicted Functional Partners:
cyaA2
CyaA2; Adenylate cyclase CyaA (ATP pyrophosphate-lyase) (Adenylyl cyclase).
  
     0.666
ilvY
IlvY; HTH-type transcriptional activator protein IlvY; Belongs to the LysR transcriptional regulatory family.
  
     0.630
prc
Prc; Tail-specific protease Prc [precursor] (Protease Re) (PRC protein) (C-terminal-processing peptidase); Belongs to the peptidase S41A family.
  
     0.501
polB
PolB; DNA polymerase II PolB.
  
     0.495
ACN15391.1
Putative translation initiation factor 1A-3 (aIF-1A-3).
  
     0.473
efp2
Efp2; Translation elongation factor EF-P.
  
     0.465
napH
NapH; Iron-sulfur binding protein NapH (4Fe-4S ferredoxin).
       0.427
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.