STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14114.1Transcriptional regulator (TetR-family protein). (217 aa)    
Predicted Functional Partners:
mcmL
McmL; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
 
 
 0.832
ACN13424.1
HTH-type transcriptional regulator (TetR-family protein).
  
     0.652
ACN16633.1
HTH-type transcriptional regulator (TetR family protein).
  
     0.617
ACN16151.1
Conserved hypothetical protein.
  
     0.581
ACN13413.1
HTH-type transcriptional regulator (TetR-family protein).
  
     0.567
acsL2
AcsL2; long-chain-fatty-acid-CoA ligase AcsL2 (AMP-binding protein).
 
   
 0.508
ACN13888.1
Transcriptional regulator (TetR family protein).
  
     0.496
ACN16274.1
Predicted polyketide synthase.
     
 0.478
atoB2
AtoB2; acetyl-CoA acetyltransferase AtoB2; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.473
acd3
Acd3; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd3 (butyryl-CoA dehydrogenase).
     
 0.447
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.