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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcmLMcmL; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. (1091 aa)    
Predicted Functional Partners:
sbm
Sbm; Homodimeric methylmalonyl-CoA mutase Sbm (MCM-alpha).
 
 
0.999
argK
ArgK; LAO/AO transport system kinase.
 
  
0.929
ACN14114.1
Transcriptional regulator (TetR-family protein).
 
 
 
 0.832
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
     
 0.771
ACN15261.1
acetyl-CoA hydrolase/transferase family protein.
  
  
 0.768
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
 
  
 0.725
ACN13616.1
Putative 4-hydroxybutyrate CoA-transferase.
  
  
 0.706
atoB2
AtoB2; acetyl-CoA acetyltransferase AtoB2; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.697
cat3
Cat3; 4-hydroxybutyrate coenzyme A transferase.
  
  
 0.685
cat4
Cat4; 4-hydroxybutyrate coenzyme A transferase Cat.
  
  
 0.685
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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