STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nemANemA; Flavoprotein NADH-dependent oxidoreductase NemA. (363 aa)    
Predicted Functional Partners:
ACN14606.1
Zinc-containing oxidoreductase.
 
  
 0.510
ACN16274.1
Predicted polyketide synthase.
  
  
 0.448
ACN14791.1
Transcriptional regulator (CarD family protein).
   
    0.434
narH
NarH; Nitrate reductase, beta subunit.
    
   0.431
etfB1
EtfB1; Electron transfer flavoprotein, beta subunit EtfB1 (Electron transfer flavoprotein small subunit) (ETFSS).
  
 
 0.411
etfB2
EtfB2; Electron transfer flavoprotein, beta-subunit EftB2 (beta-ETF) (ETFSS).
  
 
 0.411
etfB3
EtfB3; Electron transfer flavoprotein, beta-subunit EftB3 (beta-ETF) (ETFSS).
  
 
 0.411
etfB4
EtfB4; Electron transfer flavoprotein, beta-subunit EftB4 (beta-ETF) (ETFSS).
  
 
 0.411
ACN14122.1
Conserved hypothetical protein.
       0.407
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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