STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14186.1Transcriptional regulator (XRE family protein). (182 aa)    
Predicted Functional Partners:
acd4
Acd4; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd4 (butyryl-CoA dehydrogenase).
  
    0.733
hutC
HutC; Histidine utilization repressor HutC.
 
  
 0.646
ACN16420.1
Transcriptional regulator (GntR family protein).
 
  
 0.643
ACN16274.1
Predicted polyketide synthase.
  
 
 0.642
ACN14187.1
Branched-chain amino acid aminotransferase.
 
   
 0.528
guaA1
GuaA1; Catalyzes the synthesis of GMP from XMP.
     
 0.475
ACN15256.1
Putative anthranilate synthase component II.
  
  
 0.470
ACN16399.1
Putative amino-acid acetyltransferase.
  
  
 0.466
ACN15452.1
Putative NAD-dependent deacetylase (Sir2-family protein).
  
    0.462
npdA
NpdA; NAD-dependent deacetylase (Sir2 family) NpdA.
  
    0.462
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.