STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyaD2HyaD2; Hydrogenase expression/formation protein HyaD2. (163 aa)    
Predicted Functional Partners:
ACN14474.1
Coenzyme F420-reducing hydrogenase.
 
 
 0.965
mvhG
MvhG; F420-non-reducing hydrogenase, iron-sulfur subunit mvhG.
 
  
 0.960
mvhA
MvhA; F420-non-reducing hydrogenase, iron-sulfur subunit mvhA.
 
  
 0.949
ACN16425.1
Putative coenzyme F420 hydrogenase, beta subunit (8-hydroxy-5-deazaflavin-reducing hydrogenase, beta subunit) (FRH).
 
 
 0.932
hysB
HysB; Periplasmic [NiFeSe] hydrogenase, small subunit precursor HysB.
 
  
 0.879
hdrF2
HdrF2; Heterodisulfide reductase, subunit HdrF2 (selenocysteine containing protein, HdrCB homoloque).
  
  
 0.747
hynA
HynA; Periplasmic [NiFe] hydrogenase, large subunit HynA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.731
hysA
HysA; Periplasmic [NiFeSe] hydrogenase, large subunit precursor HysA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.703
hynB
HynB; Periplasmic [NiFe] hydrogenase, small subunit HynB.
 
  
 0.689
dctM1
DctM1; TRAP-type C4-dicarboxylate permease, large subunit DctM1.
      
 0.671
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.