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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrA2HdrA2; Heterodisulfide reductase HdrA2 (selenocysteine protein). (1017 aa)    
Predicted Functional Partners:
mvhD2
MvhD2; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD2 (selenocysteine protein; 4Fe-4S).
 
 0.963
mvhD3
MvhD3; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD3 (selenocysteine protein; 4Fe-4S).
 
 0.948
hdrF2
HdrF2; Heterodisulfide reductase, subunit HdrF2 (selenocysteine containing protein, HdrCB homoloque).
 
 
 0.943
fdhB5
FdhB5; Formate dehydrogenase, beta chain FdhB5 (4Fe-4S family protein).
 
 
 0.922
mvhD6
MvhD6; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD6 (4Fe-4S).
 
 0.920
qmoB
QmoB; Quinone-interacting membrane-bound oxidoreductase complex, subunit QmoB.
 
 
0.911
mvhD5
MvhD5; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD5 (selenocysteine protein; 4Fe-4S).
 
 0.910
hdrF1
HdrF1; Heterodisulfide reductase, subunit HdrF1' (HdrB homologue protein).
 
 
 0.890
hdrD2-2
HdrD2; Heterodisulfide reductase, subunit HdrD2' (HdrB homologue protein).
 
 
 0.884
mvhD4
MvhD4; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD4 (4Fe-4S).
 
 0.849
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.