STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhB3FdhB3; NADH-dependent, cytoplasmic formate dehydrogenase, beta chain FdhB3 (4Fe-4S family protein). (270 aa)    
Predicted Functional Partners:
mvhD3
MvhD3; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD3 (selenocysteine protein; 4Fe-4S).
 
     0.943
hdrA2
HdrA2; Heterodisulfide reductase HdrA2 (selenocysteine protein).
 
   
 0.826
rnfD1
RnfD1; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
  
 
 0.808
rnfD2
RnfD2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.
  
 
 0.808
rnfG1
RnfG1; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
  
 
 0.776
rnfG2
RnfG2; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.
  
 
 0.776
ACN15236.1
4Fe-4S ferredoxin, iron-sulfur binding protein.
 
 
 0.774
mvhD5
MvhD5; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD5 (selenocysteine protein; 4Fe-4S).
 
     0.769
mvhD7
MvhD7; F420-non-reducing hydrogenase, iron-sulfur subunit MvhD7 (4Fe-4S).
 
     0.760
dsrA1
DsrA1; Dissimilatory sulfite reductase complex, alpha subunit DsrA1 (Hydrogensulfite reductase alpha subunit).
 
   
 0.748
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.