STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14314.1Putative N-acetylmuramoyl-L-alanine amidase AmpD. (439 aa)    
Predicted Functional Partners:
ACN14373.1
Hypothetical protein.
  
     0.649
ACN16552.1
Putative flavodoxin family protein.
  
     0.629
ACN14689.1
Putative HTH-type transcriptional regulator.
  
     0.620
ACN14153.1
Beta-lactam acylase family protein precursor.
  
     0.591
ACN17389.1
Hypothetical protein.
  
   
 0.555
ACN13344.1
Conserved hypothetical protein.
 
     0.541
ACN14315.1
Hypothetical protein.
       0.541
ACN16274.1
Predicted polyketide synthase.
 
   
 0.517
ACN15203.1
Transcriptional regulator (Fis family protein).
  
     0.507
ACN13541.1
Putative transcriptional regulator.
  
   
 0.504
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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