STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
putA1PutA1; Bifunctional protein PutA [Includes: Proline dehydrogenase; P5C dehydrogenase]. (303 aa)    
Predicted Functional Partners:
putA2
PutA2; NAD-dependent aldehyde dehydrogenase PutA; Belongs to the aldehyde dehydrogenase family.
 0.997
proC
ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.947
ACN16918.1
NAD-dependent aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 
 0.944
aldA
AldA; Aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family.
 
 
 0.939
prdF1
PrdF1; Proline racemase PrdF; Belongs to the proline racemase family.
    
 0.909
prdF2
PrdF2; Proline racemase PrdF; Belongs to the proline racemase family.
    
 0.909
pflD1
PflD1; Formate C-acetyltransferase PflD1 (Pyruvate formate-lyase 1).
     
 0.900
pflD2
PflD2; Formate C-acetyltransferase PflD2 (Pyruvate formate-lyase 2) PflD2.
     
 0.900
lldD
LldD; Cytochrome-type L-lactate dehydrogenase LldD.
  
  
 0.821
ACN14676.1
Sodium/solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.815
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.