STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN14371.1Conserved hypothetical protein. (519 aa)    
Predicted Functional Partners:
soxA2
SoxA2; Sarcosine oxidase, subunit alpha SoxA.
   
 0.967
ACN16274.1
Predicted polyketide synthase.
  
 0.949
nuoE
NuoE; NADH-ubiquinone oxidoreductase, 24 kD subunit.
   
 0.926
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
  
 0.912
nuoF
NuoF; NADH-quinone oxidoreductase, NADH-binding subunit NuoF.
   
 0.907
ACN14973.1
Peptidase M16 family protein; Belongs to the peptidase M16 family.
   
 
 0.870
acpP
AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 0.841
ACN17766.1
Putative acyl carrier protein.
   
 0.841
gltD3
GltD3; Glutamate synthase, beta chain GltD.
  
 0.788
fdx1
Fdx1; 4Fe-4S ferredoxin, iron-sulfur binding family protein Fdx1.
   
 0.773
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.